context_location {genomics_context} R Documentation

make the chromosome mapping of the blastn hits result data

Description

Usage

context_location(blastn,
    eval.thres = 1.7976931348623157E+308);

Arguments

blastn

a collection of the blastn tabular format hit record data (HitRecord) for make the chromosome mapping.

eval.thres

the maximum e-value threshold of the accepted blastn hits. [as double]

env

the R# runtime environment object. [as Environment]

Details

Authors

seqtoolkit

Value

the chromosome mapping of the accepted blastn hits;

this function returns a R# error message object if the input blastn hits data can not be cast to a collection of the HitRecord object.

clr value class

Examples


[Package genomics_context version 1.0.0.0 Index]