NucleotideLocation {SMRUCC.genomics.ComponentModel.Loci}

.NET clr documentation

NucleotideLocation

Description

Loci segment location information on an nucleotide sequence, this object added an NucleotideLocation.Strand information on Location data.(会自动根据LEFT和RIGHT的值来修正属性值)

Declare

            
# namespace SMRUCC.genomics.ComponentModel.Loci
export class NucleotideLocation extends Location {
   Center: integer;
   # NucleotideLocation: 实际的物理上面的位置，与核酸链的方向相关，
   #  (假若需要使用原始的位置数据，则请使用Location.left或者Location.right属性，
   #  这两个属性值是和具体的链的方向无关的)
   Ends: integer;
   FragmentSize: integer;
   Interval: integer;
   IsNormalized: boolean;
   # 当任意一个断点为0的时候就无效
   IsValid: boolean;
   left: integer;
   Max: integer;
   Min: integer;
   right: integer;
   # NucleotideLocation: 实际的物理上面的位置，与核酸链的方向相关，
   #  (假若需要使用原始的位置数据，则请使用Location.left或者Location.right属性，
   #  这两个属性值是和具体的链的方向无关的)
   Start: integer;
   # 这个位点在哪一条DNA核酸链
   # 
   # 
 Forward =  1; 
   #  Reverse = -1; 
   #  Unknown =  0
   # 
   Strand: Strands;
   Tag: JavaScriptObject;
   # 用户对这个位点的自定义标注信息
   tagStr: string;
}

        

.NET clr type reference tree

1. this class extends from Location class: Location
2. use by property member Strand: Strands
3. use by property member Tag: JavaScriptObject

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