{genomics_context} R# Documentation

genomics_context

require(GCModeller);

#' the tools for processing of the genomics context information
imports "genomics_context" from "seqtoolkit";

the tools for processing of the genomics context information



.NET clr function exports
as.data.frame.primercoverage PrimerCoverage:
genomics_context
primer_coverage
set_context

set genomics context of the matched motif site
filter_strand

filter genes by given strand direction
location

create a new nucleotide location object
is.forward

assert that does the given nucleotide location is in forward direction?
offset

do offset of the given location
context

Create a new context model of a specific genomics feature site.
relationship

get the segment relationship of two location
context_location
TSS_upstream

get TSS upstream site sequence data
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