read.scans {bioseq.patterns} R Documentation

read the motif match scan result table file

Description

Usage

read.scans(file,
    tqdm = FALSE);

Arguments

file

a file path to a csv format motif match scan result table file, which is generated by the motif.find_sites api via the write.csv api. [as string]

tqdm

read the table data in a lazy stream mode? if this parameter is TRUE, then a lazy pipeline collection will be returned, which is helpful for read a huge csv table file without loading all of the data rows into the memory at once. [as boolean]

Details

Authors

seqtoolkit

Value

a vector of the MotifMatch motif match scan result, or a lazy pipeline collection of the MotifMatch object when the tqdm parameter is TRUE.

clr value class

Examples


[Package bioseq.patterns version 1.0.0.0 Index]