Create the gsea background model for metabolism analysis

metpa {background}

R Documentation

Create the gsea background model for metabolism analysis

Description

Usage

metpa(kegg, reactions,
    org.name = NULL,
    is.ko.ref = FALSE,
    multipleOmics = FALSE);

Arguments

kegg

the kegg Pathway model collection of current organism or the KEGG @T:SMRUCC.genomics.Assembly.KEGG.WebServices.XML.Map

reactions

A collection of the reference @T:SMRUCC.genomics.Model.Network.KEGG.ReactionNetwork.ReactionTable

org.name

[as string]

is.ko.ref

[as boolean]

env

[as Environment]




        Details

        

        Authors

        gseakit

        Value

        this function returns data object of type metpa.clr value class
metpa

        Examples

        

        
        [Package background version 1.0.0.0 Index]