metpa {background} R Documentation

Create the gsea background model for metabolism analysis

Description

Usage

metpa(kegg, reactions,
    org.name = NULL,
    is.ko.ref = FALSE,
    multipleOmics = FALSE);

Arguments

kegg

the kegg Pathway model collection of current organism or the KEGG Map data collection. andalso could be a tuple list of the idset.

reactions

A collection of the reference ReactionTable model data for build the metabolism network

org.name

[as string]

is.ko.ref

[as boolean]

env

[as Environment]

Details

Authors

gseakit

Value

this function returns data object of type metpa.

clr value class

Examples

[Package background version 1.0.0.0 Index]