measure_homogeneity {sigma_difference} R Documentation

measuring the homogeneity property using a specific rule

Description

sequence between the dnaA and gyrB gene in batch.

(批量计算比较基因组序列之间的同质性)

Usage

measure_homogeneity(partition.data, rule, st, sp);

Arguments

PartitionData

-

RuleSource

The original GenBank dowunload data directory which should contains the *.ptt file for parsing the rule sequence between dnaA and gyrB gene and the *.fna file for parsing the genome nt fasta sequence.

Details

Authors

seqtoolkit

Value

this function returns data object of type DataFrame.

clr value class

Examples


[Package sigma_difference version 1.0.0.0 Index]