| partitioning_data: PartitioningData | The genome partitional data.(基因组分区数据) |
| site_sigma: SiteSigma | 基因组两两比较所得到的位点距离数据 |
| compile.cai | |
| read.csv.site_delta | |
| sigma_diff.query | |
| compile.delta_query | |
| Compile.CAI | |
| rendering_merge.delta_source | 要求所有的文件都必须要为同一个基因组比对不同的基因组,不可以改动输出文件的文件名 |
| write.csv.genome_partition_data | |
| read.csv.genome_partition_data | |
| partition_data.create | |
| Read.Csv.Chromsome_Partitioning | |
| genome.sigma_diff | 并行版本的计算函数 |
| Partition.Similarity.Calculates | 计算基因组之中的不同的功能分段之间的同质性 |
| Partitions.Creates | |
| measure_homogeneity | measuring the homogeneity property using a specific rule sequence between the dnaA and gyrB gene in batch. (批量计算比较基因组序列之间的同质性) |