{sigma_difference} R# Documentation

sigma_difference


require(GCModeller);

{$desc_comments}
imports "sigma_difference" from "seqtoolkit";

.NET clr type export
partitioning_data: PartitioningData

The genome partitional data.(基因组分区数据)



.NET clr function exports
compile.cai
read.csv.site_delta
sigma_diff.query
compile.delta_query
Compile.CAI
rendering_merge.delta_source

要求所有的文件都必须要为同一个基因组比对不同的基因组,不可以改动输出文件的文件名

write.csv.genome_partition_data
read.csv.genome_partition_data
partition_data.create
Read.Csv.Chromsome_Partitioning
genome.sigma_diff

并行版本的计算函数

Partition.Similarity.Calculates

计算基因组之中的不同的功能分段之间的同质性

Partitions.Creates
Measure.Homogeneity

measuring the homogeneity property using a specific rule sequence between the dnaA and gyrB gene in batch. (批量计算比较基因组序列之间的同质性)


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