split the motif matches result in parts by its gene source

split_match_source {bioseq.patterns}

R Documentation

split the motif matches result in parts by its gene source

Description

Usage

split_match_source(matches,
    gff = NULL);

Arguments

matches

the motif match result data for split, which can be a vector of the MotifMatch object or a file path of the csv format motif match result table.

gff

a GFFTable genomics feature annotation table for map the match result to its source gene feature. If this parameter is not specified, then the match result will be grouped by the first token of the match title. [as GFFTable]

env

the R# runtime environment object. [as Environment]

Authors

seqtoolkit

Value

a named list of the MotifMatch match result group: the name of each list element is the gene source id, and the element value is a vector of the MotifMatch object that belongs to the corresponding gene source.

clr value class

any kind

[Package bioseq.patterns version 1.0.0.0 Index]