read the diamond m8 annotation table file output

read_m8 {annotation.workflow}

R Documentation

read_m8(file,
    stream = FALSE,
    filter = "unknown",
    parseHitId = -1,
    hitIdDeli = "|");

file

the file path of the diamond m8 format annotation table file. [as string]

stream

read the table data in a lazy stream manner?. [as boolean]

filter

the keyword for filter the annotation result. [as string]

parseHitId

the index number of the token in the hit id text for make the hit name parse, a negative value means no parse. [as integer]

hitIdDeli

the delimiter character for split the hit id text. [as string]

seqtoolkit

a vector of the DiamondAnnotation diamond annotation object, or a lazy pipeline collection of this data when the stream parameter is TRUE.

[Package annotation.workflow version 1.0.0.0 Index]