read ncbi blast output format 6 (tabular) file for blastn result mapping to genome sequence

read.outfmt6 {annotation.workflow}

R Documentation

read.outfmt6(file,
    make.query.group = FALSE);

file

the input source: a file path of the blast output format 6 tabular table file, or a file stream object of the target table file.

make.query.group

group the hits result by the query id? if this parameter is TRUE, then a named list of the hits result group will be returned. [as boolean]

env

the R# runtime environment object. [as Environment]

seqtoolkit

a vector of the HitRecord blast hits result object, or a named list of the hits result group when the make_query_group parameter is TRUE;

this function returns a R# error message object if the given file can not be opened for read.

[Package annotation.workflow version 1.0.0.0 Index]