read.blast {annotation.workflow} R Documentation

Open the blast output text file for parse data result.

Description

Usage

read.blast(file,
    type = "nucl",
    fastMode = TRUE);

Arguments

file

the file path of the blast output text file. [as string]

type

nucl or prot. [as string]

fastMode

run the blastp output parser in the fast mode?. [as boolean]

env

the R# runtime environment object. [as Environment]

Details

Authors

seqtoolkit

Value

a collection of the query hits result details

clr value class

Examples

[Package annotation.workflow version 1.0.0.0 Index]