apply a text grep script on the query name or hit name of the blast

grep.names {annotation.workflow}

R Documentation

query result data

grep.names(query, operators,
    applyOnHits = FALSE);

query

a lazy pipeline collection of the blast query hits result (Query), which is created by the read.blast api. [as pipeline]

operators

the text grep script for do the name string replacement: a text grep script string, or a compiled text grep engine object.

applyOnHits

apply the text grep script on the hit name instead of the query name?. [as boolean]

env

the R# runtime environment object. [as Environment]

seqtoolkit

a lazy pipeline collection of the Query blast query result which its name data has been processed by the given text grep script;

this function returns a R# error message object if the given text grep program is invalid.

[Package annotation.workflow version 1.0.0.0 Index]