| build.PICRUSt_db {microbiome} |
R Documentation |
build PICRUSt binary database file
Description
Usage
build.PICRUSt_db(ggtax, copyNumbers.16s, ko.13.5.precalculated, save);
Arguments
ggtax
A helper table gg_13_8_99.gg.tax for make OTU id mapping to taxonomy information. [as otu_taxonomy]
ko.13.5.precalculated
file connection to the ko_13_5_precalculated.tab. [as Stream]
save
the file connection for save the compiled PICRUSt binary database file. [as Stream]
copyNumbers.16s
a list of the 16s RNA copy number, [#OTU_IDs => 16S_rRNA_Count]. [as list]
Details
write the data matrix via MetaBinaryWriter
Authors
metagenomics_kit
Value
this function returns data object of type boolean.
clr value class
Examples
[Package
microbiome version 1.0.0.0
Index]