compound {repository} R Documentation

construct a new kegg compound data model

Description

Usage

compound(entry, name, formula, exactMass,
    reaction = NULL,
    enzyme = NULL,
    remarks = NULL,
    KCF = NULL,
    DBLinks = NULL,
    pathway = NULL,
    modules = NULL);

Arguments

entry

the kegg compound id. [as string]

name

the compound common names. [as string]

formula

the chemical formula of the kegg compound. [as string]

exactMass

the evaluated exact mass value based on the formula string. [as double]

reaction

A set of the related kegg reaction data about current metabolite. [as string]

enzyme

A set of the related enzyme that associated with the reaction list. [as string]

remarks

comment text about this metabolite. [as string]

KCF

the molecular strucutre text. [as string]

DBLinks

A dataframe object that contains the external reference link to other database of current metabolite object, data fields: "db", "id", "link" should be exists in this dataframe object. [as dataframe]

pathway

[as dataframe]

modules

[as dataframe]

Details

Authors

kegg_kit

Value

this function returns data object of type Compound.

clr value class

Examples


[Package repository version 1.0.0.0 Index]