kegg.reconstruction {metabolism} R Documentation

do kegg pathway reconstruction by given protein annotation data

Description

Usage

kegg.reconstruction(reference, reactions, annotations,
    min.cov = 0.3);

Arguments

reference

the kegg reference maps

reactions

a list of the kegg reaction data models

annotations

-

min.cov

[as double]

env

[as Environment]

Details

Authors

kegg_kit

Value

this function returns data object of type pipeline.

clr value class

Examples

[Package metabolism version 1.0.0.0 Index]