{metabolism} R# Documentation

metabolism


require(GCModeller);

#' The kegg metabolism model toolkit
imports "metabolism" from "kegg_kit";

The kegg metabolism model toolkit



.NET clr function exports
as.data.frame.compound Compound:

A data model for the KEGG compound.

load.reaction.cacheIndex
related.compounds

Get compounds kegg id which is related to the given KO id list

filter.invalid_keggIds

Removes invalid kegg compound id

kegg_reconstruction

do kegg pathway reconstruction by given protein annotation data

pickNetwork

pick the reaction list from the kegg reaction network repository by KO id terms


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