word.count {sigma_difference} R Documentation

Count the absolute occurrences of one oligonucleotide word in the genome

Description

sequence (e.g. the CTAG rarity report).

Usage

word.count(nt, word);

Arguments

nt

the genome nucleotide sequence. [as FastaSeq]

word

the oligonucleotide word to be counted. [as string]

Details

Authors

comparative_toolkit

Value

the number of occurrences

clr value class

Examples


[Package sigma_difference version 1.0.0.0 Index]