PredictedGene {SMRUCC.genomics.Annotation.Prodigal}

.NET clr documentation

PredictedGene

Description

预测基因（从DP选出的最终结果）

Declare

            
# namespace SMRUCC.genomics.Annotation.Prodigal
export class PredictedGene extends CandidateORF {
   AaSequence: string;
   CodingScore: double;
   # 置信度
   Confidence: double;
   DpScore: double;
   End: integer;
   Frame: integer;
   # 基因编号（在序列内的顺序号）
   GeneIndex: integer;
   Length: integer;
   NtSequence: string;
   PartialType: string;
   PrevIndex: integer;
   RawEnd: integer;
   RawStart: integer;
   RbsMotif: string;
   RbsScore: double;
   RbsSpacing: integer;
   Selected: boolean;
   SeqId: string;
   SortIndex: integer;
   Start: integer;
   StartCodon: string;
   StartScore: double;
   StopCodon: string;
   Strand: string;
   TotalScore: double;
   TypeScore: double;
   UpstreamScore: double;
}

        

.NET clr type reference tree

1. this class extends from CandidateORF class: CandidateORF

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