FusionMethods {SMRUCC.genomics.Analysis.HTS.GSVA.Fusion} .NET clr documentation

FusionMethods

Description

组学加权融合策略(method.md 步骤4)。

所有权重都是逐通路计算的:每条通路只使用在该通路中有分数的组学层, 因此不同通路可以有不同的组学权重组合。

Declare

            
# namespace SMRUCC.genomics.Analysis.HTS.GSVA.Fusion
export class FusionMethods extends Enum {
   # 等权融合 w_k = 1/K(Baseline 1)
   Equal: FusionMethods = 0;

   # 方差倒数加权 w_k ∝ 1/Var(ES_k)(抑制噪声大的组学)
   Variance: FusionMethods = 1;

   # 信息熵加权 w_k ∝ H(ES_k)(偏好区分度高的组学)
   Entropy: FusionMethods = 2;

   # 互信息一致性加权 w_k ∝ mean_k' I(k, k')(偏好与其他组学一致的组学)
   MutualInformation: FusionMethods = 3;

   # 组学特征数平衡 w_k ∝ 1/log2(2+|S_k|)(抑制成员多的组学)
   Balanced: FusionMethods = 4;

}

        

.NET clr type reference tree

  1. this class extends from Enum class: Enum
  2. use by field member Equal: FusionMethods
  3. use by field member Variance: FusionMethods
  4. use by field member Entropy: FusionMethods
  5. use by field member MutualInformation: FusionMethods
  6. use by field member Balanced: FusionMethods

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