as.gff3 {bifrost} R Documentation

cast the gene prediction result as GFF3 table format

Description

Usage

as.gff3(x);

Arguments

x

env

[as Environment]

Details

Authors

seqtoolkit

Value

a GFFTable object that contains all of the predicted genes as the CDS feature, the score of each feature is the total score of the corresponding predicted gene, and the score details are stored in the attributes of the feature, example as start_codon, rbs_motif, cscore, sscore, rscore, tscore, uscore and partial.

this function returns a R# error message object if the input data can not be cast to a collection of the PredictionResult object.

clr value class

Examples


[Package bifrost version 1.0.0.0 Index]