setZero {geneExpression} R Documentation

set the expression value to zero

Description

<br /> if the expression value is less than a given threshold

Usage

setZero(expr0,
    q = 0.1);

Arguments

expr0

[as Matrix]

q

[as double]

Details

the quantile cutoff value is evaluated for each gene feature row independently, so that the row of the low expression level will not be wiped out entirely.

Authors

phenotype_kit

Value

the input matrix object that the expression value which is less than or equals to the quantile cutoff of the corresponding gene feature row has been set to ZERO.

clr value class

Examples


[Package geneExpression version 1.0.0.0 Index]