pca {geneExpression} R Documentation

do PCA on a gene expressin matrix

Description

Usage

pca(x,
    npc = 3);

Arguments

x

[as Matrix]

npc

[as integer]

Details

Authors

phenotype_kit

Value

a data frame object of the PCA score result: each row is a gene feature in the input expression matrix(the row name is the gene id), and the columns are the principal component scores: PC1, PC2, ... PC{npc}.

clr value class

Examples


[Package geneExpression version 1.0.0.0 Index]