filter_classification {kmers} R Documentation

filter the reads data that has the specific taxonomy id assignment.

Description

Usage

filter_classification(kraken.output, taxids,
    ncbi.taxonomy = NULL,
    strict = TRUE);

Arguments

kraken.output

taxids

env

[as Environment]

Details

Authors

metagenomics_kit

Value

this function returns data object of type KrakenOutputRecord.

clr value class

Examples

[Package kmers version 1.0.0.0 Index]