parse.highlight_tuples {report.utils} R Documentation

Parse the kegg pathway node highlight information

Description

Usage

parse.highlight_tuples(x,
    default = "red");

Arguments

x

should be a character string that contains the pathway nodes id and optional highligh color for make the kegg pathway map rendering.

value should be in formats of:

"K00001:blue;K00002:red;C00001:green"

where the first part is the kegg id, the second part is the highlight color.

or just a list of the kegg id without highlight color, such as:

"K00001;K00002;C00001" . [as string]

default

[as string]

Details

Authors

kegg_kit

Value

a tuple list that contains the highlight information, such as:

 list(K00001 = "blue", K00002 = "red", C00001 = "green");

clr value class

Examples


[Package report.utils version 1.0.0.0 Index]