xgmml.render {xgmml} R Documentation

render the cytoscape network graph model as image

Description

Usage

xgmml.render(model,
    size = "10(A0)",
    convexHull = NULL,
    edgeBends = FALSE,
    altStyle = FALSE,
    rewriteGroupCategoryColors = "TSF",
    enzymeColorSchema = "Set1:c8",
    compoundColorSchema = "Clusters",
    reactionKOMapping = NULL,
    compoundNames = NULL);

Arguments

model

the network graph object or the cytoscape network model

size

the size of the output image. [as string]

convexHull$

-

edgeBends

[as boolean]

altStyle

[as boolean]

rewriteGroupCategoryColors$

-

enzymeColorSchema$

-

compoundColorSchema$

-

reactionKOMapping

[as list]

compoundNames

[as list]

Details

Authors

cytoscape_toolkit

Value

this function returns data object of type GraphicsData.

clr value class

Examples

[Package xgmml version 1.0.0.0 Index]