read.string_db {bioModels.stringdb.ppi} R Documentation

parse the string-db table file

Description

Usage

read.string_db(file,
    remove.taxonomyId = TRUE,
    link.matrix = FALSE,
    combine.score = -1);

Arguments

file

the string db protein links data files, example like: 1. 9606.protein.links.v11.5.txt 2. 9606.protein.links.full.v11.5.txt 3. 9606.protein.links.detailed.v11.5.txt. [as string]

Details

Authors

cytoscape_toolkit

Value

this function returns data object in these one of the listed data types: linksDetail, StringIndex.

clr value class

Examples

[Package bioModels.stringdb.ppi version 1.0.0.0 Index]