IdeogramBlock {SMRUCC.genomics.Visualize.Circos.Configurations.Nodes}

.NET clr documentation

IdeogramBlock

Description

Declare

            
# namespace SMRUCC.genomics.Visualize.Circos.Configurations.Nodes
export class IdeogramBlock extends CircosDocument {
   # 
cytogenetic bands
   band_stroke_thickness: string;
   # Ideograms can be drawn as filled, outlined, or both. When filled, the color will be taken from the last field In the karyotype file, Or Set by chromosomes_colors. Color names are discussed In
   # 
   # http://www.circos.ca/documentation/tutorials/configuration/configuration_files
   # 
   # When stroke_thickness=0p Or If the parameter Is missing, the ideogram Is has no outline And the value Of stroke_color Is Not used.
   fill: string;
   # 
in order to fill the bands with the color defined in the karyotype
   # 
   # 
file you must set fill_bands
   fill_bands: string;
   # 
the default chromosome color is set here and any value
   # 
   # 
defined in the karyotype file overrides it
   fill_color: string;
   label_case: string;
   # see etc/fonts.conf for list of font names
   label_font: string;
   label_parallel: string;
   # if ideogram radius is constant, and you'd like labels close to image edge, use the dims() Function To access the size Of the image
   # 
   # label_radius  = dims(image,radius) - 60p
   label_radius: string;
   label_size: string;
   # Fractional radius position of chromosome ideogram within image.
   # 
   # Spacing between ideograms. Suffix "r" denotes a relative value. It Is relative To circle circumference (e.g. space Is 0.5% Of circumference).
   radius: string;
   # 
show_bands determines whether the outline of cytogenetic bands
   # 
   # 
will be seen
   show_bands: string;
   show_label: string;
   Spacing: Spacing;
   # 
ideogram border color
   stroke_color: string;
   stroke_thickness: string;
   # thickness (px) of chromosome ideogram
   # 
   # Thickness of ideograms, which can be absolute (e.g. pixels, "p" suffix) Or relative ("r" suffix). When relative, it Is a fraction Of image radius.
   thickness: string;
}

        

.NET clr type reference tree

1. this class extends from CircosDocument class: CircosDocument
2. use by property member Spacing: Spacing

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