KOAssignmentCandidate {SMRUCC.genomics.Interops.NCBI.Extensions.LocalBLAST.Application.BBH}

.NET clr documentation

KOAssignmentCandidate

Description

用于存储一个查询基因的KO分配候选

Declare

            
# namespace SMRUCC.genomics.Interops.NCBI.Extensions.LocalBLAST.Application.BBH
export class KOAssignmentCandidate extends BHRHit {
   # 最终计算出的KO分配得分 S_KO
   AssignmentScore: double;
   BBH_ID: string;
   BHRScore: double;
   coverage: double;
   description: string;
   empiricalProbability: double;
   evalue: double;
   hit_length: integer;
   HitName: string;
   identities: double;
   isMatched: boolean;
   isSelfHit: boolean;
   KO: string;
   length_hit: integer;
   length_hsp: integer;
   length_query: integer;
   # 满足BHR阈值的基因数
   N: integer;
   positive: double;
   query_length: integer;
   QueryName: string;
   SBHScore: double;
   score: double;
   # 最高比特分数 S_h，来自与该KO中所有基因比对的最佳结果
   Sh: double;
   # KO中的总基因数
   X: integer;
}

        

.NET clr type reference tree

1. this class extends from BHRHit class: BHRHit

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