WindowDelta {SMRUCC.genomics.Analysis.SequenceTools.DNA_Comparative}

.NET clr documentation

WindowDelta

Description

The sliding window delta* profile data row. (CSV column names kept compatible with the legacy Site/Sigma/Similarity schema)

One point of the sliding window delta* profile: the delta-difference between the genome signature of the local 50kb window and the global average genome signature.

Declare

            
# namespace SMRUCC.genomics.Analysis.SequenceTools.DNA_Comparative
export class WindowDelta {
   # the delta* value of the window (multiplied by 1000 when reported)
   deltaStar: double;
   # the delta-difference similarity level (see DeltaStarLevels)
   level: DeltaStarLevels;
   # the 0-based start position of the window on the genome
   site: integer;
}

        

.NET clr type reference tree

1. use by property member level: DeltaStarLevels

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