Result {SMRUCC.genomics.Analysis.HTS.WGCNA}

.NET clr documentation

Result

Description

WGCNA分析结果类

Declare

            
# namespace SMRUCC.genomics.Analysis.HTS.WGCNA
export class Result {
   # 最佳beta值测试结果
   beta: BetaTest;
   # 分块分析时每个块的中间结果（含块内聚类树、连通度与块内模块）
   blockResults: BlockResult[];
   # 分块分析时的块划分（每块的基因 ID 列表）
   blocks: String[][];
   # 相关系数的计算来源（诊断信息）
   correlationSource: string;
   # hclust 风格的层次聚类结果（merge / height，与 R 的 hclust 同构）
   dendrogram: HclustResult;
   # 基因显著性结果列表 存储每个基因与每个表型的相关性分析结果
   geneSignificance: iterates(GeneSignificanceResult);
   # 层次聚类树
   hclust: Cluster;
   # 连接度向量
   K: Vector;
   # 模块特征基因详细结果列表 包含方差解释比例等信息
   moduleEigengeneResults: iterates(ModuleEigengeneResult);
   # 模块特征基因字典（模块名→特征基因值数组） 每个模块的特征基因是该模块内所有基因表达值的第一主成分
   moduleEigengenes: list;
   # 模块成员结果列表 存储每个基因与每个模块特征基因的相关性
   moduleMembership: iterates(ModuleMembershipResult);
   # 模块与表型相关性结果列表 存储每个模块与每个表型的相关性分析结果
   modulePhenotypeCorrelations: iterates(ModulePhenotypeCorrelation);
   # 模块字典（模块名→基因列表）
   modules: list;
   # 网络图对象
   network: NetworkGraph;
   # 所有beta候选值的测试结果
   softBeta: BetaTest[];
   # 各阶段的耗时统计（毫秒）
   timing: list;
   # TOM矩阵
   TOM: GeneralMatrix;
}

        

.NET clr type reference tree

1. use by property member beta: BetaTest
2. use by property member blockResults: BlockResult
3. use by property member blocks: String[]
4. use by property member dendrogram: HclustResult
5. use by property member geneSignificance: iterates(GeneSignificanceResult)
6. use by property member hclust: Cluster
7. use by property member K: Vector
8. use by property member moduleEigengeneResults: iterates(ModuleEigengeneResult)
9. use by property member moduleEigengenes: list
10. use by property member moduleMembership: iterates(ModuleMembershipResult)
11. use by property member modulePhenotypeCorrelations: iterates(ModulePhenotypeCorrelation)
12. use by property member modules: list
13. use by property member network: NetworkGraph
14. use by property member softBeta: BetaTest
15. use by property member timing: list
16. use by property member TOM: GeneralMatrix

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