perturbation_channel {GPS} R Documentation

Get or set whether the perturbation channel is enabled.

Description

Usage

perturbation_channel(gps,
    enabled = -1);

Arguments

gps

the trained model object. [as GPSModel]

enabled

1 enables, 0 disables; a negative value (the default) only reads the current state. [as integer]

env

the R# runtime environment. [as Environment]

Details

Authors

biosystem

Value

the currently effective flag. When enabled, the change of the perturbed gene is injected into the input window of its downstream targets along the prior regulatory edges, so a single gene knockdown does not have to survive several rounds of degree normalisation.

clr value class

Examples


[Package GPS version 1.0.0.0 Index]