knockdown_residual {GPS} R Documentation

Get or set the fraction of the wild type expression that is kept by an in silico knockdown.

Description

Usage

knockdown_residual(gps,
    residual = -1);

Arguments

gps

the trained model object. [as GPSModel]

residual

the residual fraction in the range [0,1); a negative value (the default) means "only read the current value without modifying it". [as double]

env

the R# runtime environment. [as Environment]

Details

Authors

biosystem

Value

the currently effective residual fraction; 0 makes a knockdown identical to a knockout and 0.2 is the CRISPRi setting used by the Virtual Cell Challenge.

clr value class

Examples

[Package GPS version 1.0.0.0 Index]