cache.ptf {ptf} R Documentation

create a protein annotation metadata file from the uniprot dataset

Description

Usage

cache.ptf(uniprot, file,
    db.xref = ['KEGG','KO','GO','Pfam','RefSeq','EC','InterPro','BioCyc','eggNOG','keyword'],
    cacheTaxonomy = FALSE,
    hds.stream = FALSE);

Arguments

uniprot

a collection of the protein data from the uniprot database

file

file path to save the metadata file

db.xref

-

cacheTaxonomy

[as boolean]

hds.stream

[as boolean]

env

[as Environment]

Details

Authors

annotationKit

Value

this function returns data object of type any kind.

clr value class

Examples

[Package ptf version 1.0.0.0 Index]