Create metpa background model for LCMS analysis

metpa_background {GCModeller}

R Documentation

Create metpa background model for LCMS analysis

Description

Usage

metpa_background(pathways,
    taxonomy.name = NULL,
    raw = TRUE,
    multiple.omics = FALSE);

Arguments

pathways

raw

if this parameter value is set to TRUE, then a raw CLR object will be returns, otherwise a converted list object will be generated from the raw CLR object.

multiple.omics

set the parameter value to TRUE for create background model for multiple omics data analysis. then this parameter option will enable the gene and compound existsed inside the model.

Details

the reaction data is loaded from the package internal resource file

Authors

xieguigang

Value

a gcmodeller background model if raw is true, and a R# object list will be converts from the clr background model otherwise the raw is not.

[Package GCModeller version 1.1.0-beta Index]